// Copyright ©2021 The Gonum Authors. All rights reserved. // Use of this source code is governed by a BSD-style // license that can be found in the LICENSE file. package distuv import ( "math" "golang.org/x/exp/rand" "gonum.org/v1/gonum/mathext" ) // Chi implements the χ distribution, a one parameter distribution // with support on the positive numbers. // // The density function is given by // // 1/(2^{k/2-1} * Γ(k/2)) * x^{k - 1} * e^{-x^2/2} // // For more information, see https://en.wikipedia.org/wiki/Chi_distribution. type Chi struct { // K is the shape parameter, corresponding to the degrees of freedom. Must // be greater than 0. K float64 Src rand.Source } // CDF computes the value of the cumulative density function at x. func (c Chi) CDF(x float64) float64 { return mathext.GammaIncReg(c.K/2, (x*x)/2) } // Entropy returns the differential entropy of the distribution. func (c Chi) Entropy() float64 { lg, _ := math.Lgamma(c.K / 2) return lg + 0.5*(c.K-math.Ln2-(c.K-1)*mathext.Digamma(c.K/2)) } // ExKurtosis returns the excess kurtosis of the distribution. func (c Chi) ExKurtosis() float64 { v := c.Variance() s := math.Sqrt(v) return 2 / v * (1 - c.Mean()*s*c.Skewness() - v) } // LogProb computes the natural logarithm of the value of the probability // density function at x. func (c Chi) LogProb(x float64) float64 { if x < 0 { return math.Inf(-1) } lg, _ := math.Lgamma(c.K / 2) return (c.K-1)*math.Log(x) - (x*x)/2 - (c.K/2-1)*math.Ln2 - lg } // Mean returns the mean of the probability distribution. func (c Chi) Mean() float64 { lg1, _ := math.Lgamma((c.K + 1) / 2) lg, _ := math.Lgamma(c.K / 2) return math.Sqrt2 * math.Exp(lg1-lg) } // Median returns the median of the distribution. func (c Chi) Median() float64 { return c.Quantile(0.5) } // Mode returns the mode of the distribution. // // Mode returns NaN if K is less than one. func (c Chi) Mode() float64 { return math.Sqrt(c.K - 1) } // NumParameters returns the number of parameters in the distribution. func (c Chi) NumParameters() int { return 1 } // Prob computes the value of the probability density function at x. func (c Chi) Prob(x float64) float64 { return math.Exp(c.LogProb(x)) } // Rand returns a random sample drawn from the distribution. func (c Chi) Rand() float64 { return math.Sqrt(Gamma{c.K / 2, 0.5, c.Src}.Rand()) } // Quantile returns the inverse of the cumulative distribution function. func (c Chi) Quantile(p float64) float64 { if p < 0 || 1 < p { panic(badPercentile) } return math.Sqrt(2 * mathext.GammaIncRegInv(0.5*c.K, p)) } // Skewness returns the skewness of the distribution. func (c Chi) Skewness() float64 { v := c.Variance() s := math.Sqrt(v) return c.Mean() / (s * v) * (1 - 2*v) } // StdDev returns the standard deviation of the probability distribution. func (c Chi) StdDev() float64 { return math.Sqrt(c.Variance()) } // Survival returns the survival function (complementary CDF) at x. func (c Chi) Survival(x float64) float64 { if x < 0 { return 1 } return mathext.GammaIncRegComp(0.5*c.K, 0.5*(x*x)) } // Variance returns the variance of the probability distribution. func (c Chi) Variance() float64 { m := c.Mean() return math.Max(0, c.K-m*m) }